Cluster: HRGMv2_0156_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00479
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_762 | 950308 | 952581 | - | GH92 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_763 | 952589 | 953557 | - | GH130_2 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_764 | 953574 | 954902 | - | MFS_1 | MFS_1 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_765 | 955001 | 957202 | - | GH163 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_766 | 957367 | 958332 | - | F5_F8_type_C | BT_3987-like_N | F5_F8_type_C_2 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_767 | 958356 | 959567 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_768 | 959590 | 960654 | - | GH18 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_769 | 960687 | 962264 | - | 8.A.46.2.2 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_770 | 962283 | 965609 | - | 1.B.14.6.13 |
Gene ID: HRGMv2_0156_1_762
Type: CAZyme
Location: 950308 - 952581 (-)
Type: CAZyme
Location: 950308 - 952581 (-)
Gene ID: HRGMv2_0156_1_763
Type: CAZyme
Location: 952589 - 953557 (-)
Type: CAZyme
Location: 952589 - 953557 (-)
Gene ID: HRGMv2_0156_1_764
Type: pfam
Location: 953574 - 954902 (-)
Type: pfam
Location: 953574 - 954902 (-)
Gene ID: HRGMv2_0156_1_765
Type: CAZyme
Location: 955001 - 957202 (-)
Type: CAZyme
Location: 955001 - 957202 (-)
Gene ID: HRGMv2_0156_1_766
Type: pfam
Location: 957367 - 958332 (-)
Type: pfam
Location: 957367 - 958332 (-)
Gene ID: HRGMv2_0156_1_767
Type: pfam
Location: 958356 - 959567 (-)
Type: pfam
Location: 958356 - 959567 (-)
Gene ID: HRGMv2_0156_1_768
Type: CAZyme
Location: 959590 - 960654 (-)
Type: CAZyme
Location: 959590 - 960654 (-)
Gene ID: HRGMv2_0156_1_769
Type: TC
Location: 960687 - 962264 (-)
Type: TC
Location: 960687 - 962264 (-)
Gene ID: HRGMv2_0156_1_770
Type: TC
Location: 962283 - 965609 (-)
Type: TC
Location: 962283 - 965609 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0156_1_769 | vegan > omnivore | 1.46653 | 0.00026 |
| HRGMv2_0156_1_769 | vegetarian > omnivore | 1.14858 | 0.00153 |
| HRGMv2_0156_1_770 | vegan > omnivore | 1.14388 | 0.00026 |