Cluster: HRGMv2_0156_CGC109
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_04413
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_4935 | 6437400 | 6439040 | + | GH33 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_4936 | 6439047 | 6440279 | + | 2.A.1.14.14 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_4937 | 6440316 | 6443606 | + | 1.B.14.6.1 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_4938 | 6443626 | 6445080 | + | 8.A.46.1.1 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_4939 | 6445067 | 6446227 | + | GH33 |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_4940 | 6446224 | 6446406 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_4941 | 6446526 | 6448097 | + | PKD | PKD | Laminin_G_3 | PKD_4 | PKD_4 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_4942 | 6448160 | 6450241 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_4943 | 6450433 | 6450978 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_4944 | 6451041 | 6451589 | + | Hexapep | Mac | Hexapep_2 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_4945 | 6451824 | 6454301 | + | 1.B.14.6.5 |
Gene ID: HRGMv2_0156_1_4935
Type: CAZyme
Location: 6437400 - 6439040 (+)
Type: CAZyme
Location: 6437400 - 6439040 (+)
Gene ID: HRGMv2_0156_1_4936
Type: TC
Location: 6439047 - 6440279 (+)
Type: TC
Location: 6439047 - 6440279 (+)
Gene ID: HRGMv2_0156_1_4937
Type: TC
Location: 6440316 - 6443606 (+)
Type: TC
Location: 6440316 - 6443606 (+)
Gene ID: HRGMv2_0156_1_4938
Type: TC
Location: 6443626 - 6445080 (+)
Type: TC
Location: 6443626 - 6445080 (+)
Gene ID: HRGMv2_0156_1_4939
Type: CAZyme
Location: 6445067 - 6446227 (+)
Type: CAZyme
Location: 6445067 - 6446227 (+)
Gene ID: HRGMv2_0156_1_4940
Type:
Location: 6446224 - 6446406 (+)
Type:
Location: 6446224 - 6446406 (+)
Gene ID: HRGMv2_0156_1_4941
Type: pfam
Location: 6446526 - 6448097 (+)
Type: pfam
Location: 6446526 - 6448097 (+)
Gene ID: HRGMv2_0156_1_4942
Type: CAZyme
Location: 6448160 - 6450241 (+)
Type: CAZyme
Location: 6448160 - 6450241 (+)
Gene ID: HRGMv2_0156_1_4943
Type:
Location: 6450433 - 6450978 (+)
Type:
Location: 6450433 - 6450978 (+)
Gene ID: HRGMv2_0156_1_4944
Type: pfam
Location: 6451041 - 6451589 (+)
Type: pfam
Location: 6451041 - 6451589 (+)
Gene ID: HRGMv2_0156_1_4945
Type: TC
Location: 6451824 - 6454301 (+)
Type: TC
Location: 6451824 - 6454301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0156_1_4935 | vegan > omnivore | 1.19593 | 0.00026 |
| HRGMv2_0156_1_4936 | vegan > omnivore | 1.04892 | 0.00026 |
| HRGMv2_0156_1_4937 | vegan > omnivore | 1.53403 | 0.00026 |
| HRGMv2_0156_1_4938 | vegan > omnivore | 1.56939 | 0.00026 |
| HRGMv2_0156_1_4939 | vegan > omnivore | 1.47475 | 0.00026 |
| HRGMv2_0156_1_4940 | vegan > omnivore | 1.64924 | 0.00026 |
| HRGMv2_0156_1_4940 | vegetarian > omnivore | 1.04741 | 0.00153 |
| HRGMv2_0156_1_4941 | vegan > omnivore | 1.59390 | 0.00026 |
| HRGMv2_0156_1_4942 | vegan > omnivore | 1.11710 | 0.00026 |
| HRGMv2_0156_1_4943 | vegan > omnivore | 1.16363 | 0.00026 |
| HRGMv2_0156_1_4944 | vegetarian > omnivore | 1.04722 | 0.00153 |