dbCAN HGM

Cluster: HRGMv2_0156_CGC101

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0156_1	HRGMv2_0156_1_4272	5565295	5568342	+	1.B.14.6.1
TC	HRGMv2_0156_1	HRGMv2_0156_1_4273	5568354	5569958	+	8.A.46.1.3
pfam	HRGMv2_0156_1	HRGMv2_0156_1_4274	5569988	5571127	+	SusE
CAZyme	HRGMv2_0156_1	HRGMv2_0156_1_4275	5571140	5572366	+	GH76
CAZyme	HRGMv2_0156_1	HRGMv2_0156_1_4276	5572370	5573569	+	GH76
CAZyme	HRGMv2_0156_1	HRGMv2_0156_1_4277	5573566	5575941	+	GH92
TC	HRGMv2_0156_1	HRGMv2_0156_1_4278	5576021	5577190	+	2.A.1.7.16
STP	HRGMv2_0156_1	HRGMv2_0156_1_4279	5577193	5577771	-	cNMP_binding
TC	HRGMv2_0156_1	HRGMv2_0156_1_4280	5577785	5579140	-	2.A.66.1.37

Gene ID: HRGMv2_0156_1_4272
Type: TC
Location: 5565295 - 5568342 (+)

Gene ID: HRGMv2_0156_1_4273
Type: TC
Location: 5568354 - 5569958 (+)

Gene ID: HRGMv2_0156_1_4274
Type: pfam
Location: 5569988 - 5571127 (+)

Gene ID: HRGMv2_0156_1_4275
Type: CAZyme
Location: 5571140 - 5572366 (+)

Gene ID: HRGMv2_0156_1_4276
Type: CAZyme
Location: 5572370 - 5573569 (+)

Gene ID: HRGMv2_0156_1_4277
Type: CAZyme
Location: 5573566 - 5575941 (+)

Gene ID: HRGMv2_0156_1_4278
Type: TC
Location: 5576021 - 5577190 (+)

Gene ID: HRGMv2_0156_1_4279
Type: STP
Location: 5577193 - 5577771 (-)

Gene ID: HRGMv2_0156_1_4280
Type: TC
Location: 5577785 - 5579140 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0156_1_4279	vegan > omnivore	1.37258	0.00026
HRGMv2_0156_1_4279	vegetarian > omnivore	1.40271	0.00153

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0156_1_4275	nonIBD > CD	1.00075	0.00932