dbCAN Logo

Cluster: HRGMv2_0156_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0156_1 HRGMv2_0156_1_489 576449 577903 + 2.A.68.1.2
TF HRGMv2_0156_1 HRGMv2_0156_1_490 578003 578590 + GerE
STP HRGMv2_0156_1 HRGMv2_0156_1_491 578668 579696 + FecR
TC HRGMv2_0156_1 HRGMv2_0156_1_492 579824 583213 + 1.B.14.6.1
pfam HRGMv2_0156_1 HRGMv2_0156_1_493 583242 585056 + SusD_RagB | SusD-like_3
sulfatase HRGMv2_0156_1 HRGMv2_0156_1_494 585130 586569 + S1_7
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_495 586571 588619 + GH2
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_496 588895 589062 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0156_1 HRGMv2_0156_1_497 589324 590217 + 1.A.30.1.4
Gene ID: HRGMv2_0156_1_489
Type: TC
Location: 576449 - 577903 (+)
Gene ID: HRGMv2_0156_1_490
Type: TF
Location: 578003 - 578590 (+)
Gene ID: HRGMv2_0156_1_491
Type: STP
Location: 578668 - 579696 (+)
Gene ID: HRGMv2_0156_1_492
Type: TC
Location: 579824 - 583213 (+)
Gene ID: HRGMv2_0156_1_493
Type: pfam
Location: 583242 - 585056 (+)
Gene ID: HRGMv2_0156_1_494
Type: sulfatase
Location: 585130 - 586569 (+)
Gene ID: HRGMv2_0156_1_495
Type: CAZyme
Location: 586571 - 588619 (+)
Gene ID: HRGMv2_0156_1_496
Type:
Location: 588895 - 589062 (+)
Gene ID: HRGMv2_0156_1_497
Type: TC
Location: 589324 - 590217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List