Cluster: HRGMv2_0112_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0112
- CGC Family ID: CGCFAM_03736
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0112_3 | HRGMv2_0112_3_101 | 113369 | 116905 | + | CBM47 | GH29 |
| STP | HRGMv2_0112_3 | HRGMv2_0112_3_102 | 117009 | 118655 | - | GAF | HATPase_c |
| TC | HRGMv2_0112_3 | HRGMv2_0112_3_103 | 118652 | 120406 | - | 3.A.1.129.1 |
| TC | HRGMv2_0112_3 | HRGMv2_0112_3_104 | 120403 | 122076 | - | 3.A.1.129.1 |
Gene ID: HRGMv2_0112_3_101
Type: CAZyme
Location: 113369 - 116905 (+)
Type: CAZyme
Location: 113369 - 116905 (+)
Gene ID: HRGMv2_0112_3_102
Type: STP
Location: 117009 - 118655 (-)
Type: STP
Location: 117009 - 118655 (-)
Gene ID: HRGMv2_0112_3_103
Type: TC
Location: 118652 - 120406 (-)
Type: TC
Location: 118652 - 120406 (-)
Gene ID: HRGMv2_0112_3_104
Type: TC
Location: 120403 - 122076 (-)
Type: TC
Location: 120403 - 122076 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp958349165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.