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Cluster: HRGMv2_0112_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0112_13 HRGMv2_0112_13_32 39993 41168 - GH23
pfam HRGMv2_0112_13 HRGMv2_0112_13_33 41405 42319 - TatD_DNase
peptidase HRGMv2_0112_13 HRGMv2_0112_13_34 42359 42943 - C56.UNW
TC HRGMv2_0112_13 HRGMv2_0112_13_35 43058 46471 - 3.A.1.122.13
NULL(UNKNOWN) HRGMv2_0112_13 HRGMv2_0112_13_36 46691 47263 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0112_13 HRGMv2_0112_13_37 47385 49388 - 2.A.36.3.1
pfam HRGMv2_0112_13 HRGMv2_0112_13_38 49603 50196 + Protoglobin
pfam HRGMv2_0112_13 HRGMv2_0112_13_39 50165 50764 + DNA_binding_1
TC HRGMv2_0112_13 HRGMv2_0112_13_40 50846 52129 - 2.A.120.1.1
Gene ID: HRGMv2_0112_13_32
Type: CAZyme
Location: 39993 - 41168 (-)
Gene ID: HRGMv2_0112_13_33
Type: pfam
Location: 41405 - 42319 (-)
Gene ID: HRGMv2_0112_13_34
Type: peptidase
Location: 42359 - 42943 (-)
Gene ID: HRGMv2_0112_13_35
Type: TC
Location: 43058 - 46471 (-)
Gene ID: HRGMv2_0112_13_36
Type:
Location: 46691 - 47263 (+)
Gene ID: HRGMv2_0112_13_37
Type: TC
Location: 47385 - 49388 (-)
Gene ID: HRGMv2_0112_13_38
Type: pfam
Location: 49603 - 50196 (+)
Gene ID: HRGMv2_0112_13_39
Type: pfam
Location: 50165 - 50764 (+)
Gene ID: HRGMv2_0112_13_40
Type: TC
Location: 50846 - 52129 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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