Cluster: HRGMv2_0112_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0112
- CGC Family ID: CGCFAM_03735
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0112_13 | HRGMv2_0112_13_1 | 167 | 2533 | - | GT35 |
| NULL(UNKNOWN) | HRGMv2_0112_13 | HRGMv2_0112_13_2 | 2921 | 4417 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0112_13 | HRGMv2_0112_13_3 | 4749 | 5354 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0112_13 | HRGMv2_0112_13_4 | 5556 | 6185 | - | 2.A.95.1.5 |
| pfam | HRGMv2_0112_13 | HRGMv2_0112_13_5 | 6182 | 7030 | - | PHP |
| TC | HRGMv2_0112_13 | HRGMv2_0112_13_6 | 7271 | 8731 | + | 2.A.3.1.8 |
Gene ID: HRGMv2_0112_13_1
Type: CAZyme
Location: 167 - 2533 (-)
Type: CAZyme
Location: 167 - 2533 (-)
Gene ID: HRGMv2_0112_13_2
Type:
Location: 2921 - 4417 (+)
Type:
Location: 2921 - 4417 (+)
Gene ID: HRGMv2_0112_13_3
Type:
Location: 4749 - 5354 (-)
Type:
Location: 4749 - 5354 (-)
Gene ID: HRGMv2_0112_13_4
Type: TC
Location: 5556 - 6185 (-)
Type: TC
Location: 5556 - 6185 (-)
Gene ID: HRGMv2_0112_13_5
Type: pfam
Location: 6182 - 7030 (-)
Type: pfam
Location: 6182 - 7030 (-)
Gene ID: HRGMv2_0112_13_6
Type: TC
Location: 7271 - 8731 (+)
Type: TC
Location: 7271 - 8731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp958349165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.