Cluster: HRGMv2_0112_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0112_9 | HRGMv2_0112_9_37 | 47325 | 48167 | + | 3.A.1.103.6 |
| TC | HRGMv2_0112_9 | HRGMv2_0112_9_38 | 48167 | 49459 | + | 3.A.1.103.5 |
| peptidase | HRGMv2_0112_9 | HRGMv2_0112_9_39 | 49580 | 51310 | + | C40.UPW |
| CAZyme | HRGMv2_0112_9 | HRGMv2_0112_9_40 | 51396 | 52442 | - | GT2 |
Gene ID: HRGMv2_0112_9_37
Type: TC
Location: 47325 - 48167 (+)
Type: TC
Location: 47325 - 48167 (+)
Gene ID: HRGMv2_0112_9_38
Type: TC
Location: 48167 - 49459 (+)
Type: TC
Location: 48167 - 49459 (+)
Gene ID: HRGMv2_0112_9_39
Type: peptidase
Location: 49580 - 51310 (+)
Type: peptidase
Location: 49580 - 51310 (+)
Gene ID: HRGMv2_0112_9_40
Type: CAZyme
Location: 51396 - 52442 (-)
Type: CAZyme
Location: 51396 - 52442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp958349165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.