Cluster: HRGMv2_0112_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0112
- CGC Family ID: CGCFAM_00922
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0112_1 | HRGMv2_0112_1_94 | 118643 | 120199 | - | 3.B.1.1.5 |
| sulfatase | HRGMv2_0112_1 | HRGMv2_0112_1_95 | 120196 | 121989 | - | S1_37 |
| pfam | HRGMv2_0112_1 | HRGMv2_0112_1_96 | 121976 | 122860 | - | BPL_C | BPL_LplA_LipB |
| TC | HRGMv2_0112_1 | HRGMv2_0112_1_97 | 123179 | 124861 | + | 3.A.1.120.6 |
| pfam | HRGMv2_0112_1 | HRGMv2_0112_1_98 | 125154 | 125438 | + | PTS_EIIB |
| CAZyme | HRGMv2_0112_1 | HRGMv2_0112_1_99 | 125481 | 127631 | + | GH77 |
| TC | HRGMv2_0112_1 | HRGMv2_0112_1_100 | 127725 | 128192 | - | 4.A.1.1.2 |
| TC | HRGMv2_0112_1 | HRGMv2_0112_1_101 | 128189 | 128419 | - | 4.A.1.1.1 |
| pfam | HRGMv2_0112_1 | HRGMv2_0112_1_102 | 128512 | 129774 | - | MFS_3 | MFS_1 |
| pfam | HRGMv2_0112_1 | HRGMv2_0112_1_103 | 129791 | 130489 | - | Hydrolase_3 |
| CAZyme | HRGMv2_0112_1 | HRGMv2_0112_1_104 | 130799 | 133258 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0112_1 | HRGMv2_0112_1_105 | 133303 | 133914 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0112_1 | HRGMv2_0112_1_106 | 133946 | 134956 | + | GT2 |
Gene ID: HRGMv2_0112_1_94
Type: TC
Location: 118643 - 120199 (-)
Type: TC
Location: 118643 - 120199 (-)
Gene ID: HRGMv2_0112_1_95
Type: sulfatase
Location: 120196 - 121989 (-)
Type: sulfatase
Location: 120196 - 121989 (-)
Gene ID: HRGMv2_0112_1_96
Type: pfam
Location: 121976 - 122860 (-)
Type: pfam
Location: 121976 - 122860 (-)
Gene ID: HRGMv2_0112_1_97
Type: TC
Location: 123179 - 124861 (+)
Type: TC
Location: 123179 - 124861 (+)
Gene ID: HRGMv2_0112_1_98
Type: pfam
Location: 125154 - 125438 (+)
Type: pfam
Location: 125154 - 125438 (+)
Gene ID: HRGMv2_0112_1_99
Type: CAZyme
Location: 125481 - 127631 (+)
Type: CAZyme
Location: 125481 - 127631 (+)
Gene ID: HRGMv2_0112_1_100
Type: TC
Location: 127725 - 128192 (-)
Type: TC
Location: 127725 - 128192 (-)
Gene ID: HRGMv2_0112_1_101
Type: TC
Location: 128189 - 128419 (-)
Type: TC
Location: 128189 - 128419 (-)
Gene ID: HRGMv2_0112_1_102
Type: pfam
Location: 128512 - 129774 (-)
Type: pfam
Location: 128512 - 129774 (-)
Gene ID: HRGMv2_0112_1_103
Type: pfam
Location: 129791 - 130489 (-)
Type: pfam
Location: 129791 - 130489 (-)
Gene ID: HRGMv2_0112_1_104
Type: CAZyme
Location: 130799 - 133258 (+)
Type: CAZyme
Location: 130799 - 133258 (+)
Gene ID: HRGMv2_0112_1_105
Type:
Location: 133303 - 133914 (+)
Type:
Location: 133303 - 133914 (+)
Gene ID: HRGMv2_0112_1_106
Type: CAZyme
Location: 133946 - 134956 (+)
Type: CAZyme
Location: 133946 - 134956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp958349165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.