Cluster: HRGMv2_0111_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0111
- CGC Family ID: CGCFAM_03921
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0111_54 | HRGMv2_0111_54_1 | 1 | 1164 | - | 3.B.1.1.2 |
| sulfatase | HRGMv2_0111_54 | HRGMv2_0111_54_2 | 1161 | 2951 | - | S1_37 |
| pfam | HRGMv2_0111_54 | HRGMv2_0111_54_3 | 2938 | 3822 | - | BPL_C | BPL_LplA_LipB |
| TC | HRGMv2_0111_54 | HRGMv2_0111_54_4 | 4139 | 5821 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_0111_54 | HRGMv2_0111_54_5 | 6121 | 6405 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0111_54 | HRGMv2_0111_54_6 | 6449 | 8599 | + | GH77 |
Gene ID: HRGMv2_0111_54_1
Type: TC
Location: 1 - 1164 (-)
Type: TC
Location: 1 - 1164 (-)
Gene ID: HRGMv2_0111_54_2
Type: sulfatase
Location: 1161 - 2951 (-)
Type: sulfatase
Location: 1161 - 2951 (-)
Gene ID: HRGMv2_0111_54_3
Type: pfam
Location: 2938 - 3822 (-)
Type: pfam
Location: 2938 - 3822 (-)
Gene ID: HRGMv2_0111_54_4
Type: TC
Location: 4139 - 5821 (+)
Type: TC
Location: 4139 - 5821 (+)
Gene ID: HRGMv2_0111_54_5
Type:
Location: 6121 - 6405 (+)
Type:
Location: 6121 - 6405 (+)
Gene ID: HRGMv2_0111_54_6
Type: CAZyme
Location: 6449 - 8599 (+)
Type: CAZyme
Location: 6449 - 8599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia bouchesdurhonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.