Cluster: HRGMv2_0111_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0111
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0111_21 | HRGMv2_0111_21_3 | 1299 | 2054 | + | GT2 |
| pfam | HRGMv2_0111_21 | HRGMv2_0111_21_4 | 2051 | 2512 | + | DUF2304 |
| pfam | HRGMv2_0111_21 | HRGMv2_0111_21_5 | 2832 | 4052 | - | APH |
| TC | HRGMv2_0111_21 | HRGMv2_0111_21_6 | 4195 | 5409 | + | 9.A.47.2.1 |
Gene ID: HRGMv2_0111_21_3
Type: CAZyme
Location: 1299 - 2054 (+)
Type: CAZyme
Location: 1299 - 2054 (+)
Gene ID: HRGMv2_0111_21_4
Type: pfam
Location: 2051 - 2512 (+)
Type: pfam
Location: 2051 - 2512 (+)
Gene ID: HRGMv2_0111_21_5
Type: pfam
Location: 2832 - 4052 (-)
Type: pfam
Location: 2832 - 4052 (-)
Gene ID: HRGMv2_0111_21_6
Type: TC
Location: 4195 - 5409 (+)
Type: TC
Location: 4195 - 5409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia bouchesdurhonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.