Cluster: HRGMv2_0095_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0095
- CGC Family ID: CGCFAM_00074
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0095_5 | HRGMv2_0095_5_69 | 88970 | 92407 | - | GT4 | GT97 |
| CAZyme | HRGMv2_0095_5 | HRGMv2_0095_5_70 | 92433 | 93185 | - | GT2 |
| pfam | HRGMv2_0095_5 | HRGMv2_0095_5_71 | 93297 | 94223 | + | ABC2_membrane |
| TC | HRGMv2_0095_5 | HRGMv2_0095_5_72 | 94216 | 95076 | + | 3.A.1.104.1 |
Gene ID: HRGMv2_0095_5_69
Type: CAZyme
Location: 88970 - 92407 (-)
Type: CAZyme
Location: 88970 - 92407 (-)
Gene ID: HRGMv2_0095_5_70
Type: CAZyme
Location: 92433 - 93185 (-)
Type: CAZyme
Location: 92433 - 93185 (-)
Gene ID: HRGMv2_0095_5_71
Type: pfam
Location: 93297 - 94223 (+)
Type: pfam
Location: 93297 - 94223 (+)
Gene ID: HRGMv2_0095_5_72
Type: TC
Location: 94216 - 95076 (+)
Type: TC
Location: 94216 - 95076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Dermabacteraceae
Genus
Dermabacter
Species
Dermabacter vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.