dbCAN Logo

Cluster: HRGMv2_0095_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0095_1 HRGMv2_0095_1_146 164403 165848 + GH20
pfam HRGMv2_0095_1 HRGMv2_0095_1_147 165983 167086 - NrfD | NrfD_2
TC HRGMv2_0095_1 HRGMv2_0095_1_148 167083 168066 - 5.A.3.2.1
TC HRGMv2_0095_1 HRGMv2_0095_1_149 168066 170870 - 5.A.3.2.1
TC HRGMv2_0095_1 HRGMv2_0095_1_150 170931 171497 - 5.A.3.2.1
peptidase HRGMv2_0095_1 HRGMv2_0095_1_151 171735 174290 + M01.009
TC HRGMv2_0095_1 HRGMv2_0095_1_152 174407 175333 + 1.A.23.3.2
pfam HRGMv2_0095_1 HRGMv2_0095_1_153 175340 175819 - 4HBT | 4HBT_2 | Acyl-ACP_TE_C
TC HRGMv2_0095_1 HRGMv2_0095_1_154 175835 177208 - 2.A.27.2.1
Gene ID: HRGMv2_0095_1_146
Type: CAZyme
Location: 164403 - 165848 (+)
Gene ID: HRGMv2_0095_1_147
Type: pfam
Location: 165983 - 167086 (-)
Gene ID: HRGMv2_0095_1_148
Type: TC
Location: 167083 - 168066 (-)
Gene ID: HRGMv2_0095_1_149
Type: TC
Location: 168066 - 170870 (-)
Gene ID: HRGMv2_0095_1_150
Type: TC
Location: 170931 - 171497 (-)
Gene ID: HRGMv2_0095_1_151
Type: peptidase
Location: 171735 - 174290 (+)
Gene ID: HRGMv2_0095_1_152
Type: TC
Location: 174407 - 175333 (+)
Gene ID: HRGMv2_0095_1_153
Type: pfam
Location: 175340 - 175819 (-)
Gene ID: HRGMv2_0095_1_154
Type: TC
Location: 175835 - 177208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List