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Cluster: HRGMv2_0095_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0095_30 HRGMv2_0095_30_1 2 1294 - GH38
CAZyme HRGMv2_0095_30 HRGMv2_0095_30_2 1384 2604 - GH5_18
TF HRGMv2_0095_30 HRGMv2_0095_30_3 2640 3674 + LacI
CAZyme HRGMv2_0095_30 HRGMv2_0095_30_4 3671 5050 - GH125
CAZyme HRGMv2_0095_30 HRGMv2_0095_30_5 5271 6203 + GH18
STP HRGMv2_0095_30 HRGMv2_0095_30_6 6217 7605 + SBP_bac_1
TC HRGMv2_0095_30 HRGMv2_0095_30_7 7602 8546 + 3.A.1.1.38
TC HRGMv2_0095_30 HRGMv2_0095_30_8 8543 9427 + 3.A.1.1.6
Gene ID: HRGMv2_0095_30_1
Type: CAZyme
Location: 2 - 1294 (-)
Gene ID: HRGMv2_0095_30_2
Type: CAZyme
Location: 1384 - 2604 (-)
Gene ID: HRGMv2_0095_30_3
Type: TF
Location: 2640 - 3674 (+)
Gene ID: HRGMv2_0095_30_4
Type: CAZyme
Location: 3671 - 5050 (-)
Gene ID: HRGMv2_0095_30_5
Type: CAZyme
Location: 5271 - 6203 (+)
Gene ID: HRGMv2_0095_30_6
Type: STP
Location: 6217 - 7605 (+)
Gene ID: HRGMv2_0095_30_7
Type: TC
Location: 7602 - 8546 (+)
Gene ID: HRGMv2_0095_30_8
Type: TC
Location: 8543 - 9427 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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