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Cluster: HRGMv2_0095_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0095_19 HRGMv2_0095_19_2 2150 2938 - 3.A.1.147.9
NULL(UNKNOWN) HRGMv2_0095_19 HRGMv2_0095_19_3 2972 4789 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0095_19 HRGMv2_0095_19_4 4915 6189 + 2.A.86.1.6
pfam HRGMv2_0095_19 HRGMv2_0095_19_5 6331 6819 - GreA_GreB | GreA_GreB_N
pfam HRGMv2_0095_19 HRGMv2_0095_19_6 7042 7449 - DUF4307
CAZyme HRGMv2_0095_19 HRGMv2_0095_19_7 7532 8482 + CE14
NULL(UNKNOWN) HRGMv2_0095_19 HRGMv2_0095_19_8 8479 8748 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0095_19 HRGMv2_0095_19_9 8745 9584 - 1.C.113.1.4
Gene ID: HRGMv2_0095_19_2
Type: TC
Location: 2150 - 2938 (-)
Gene ID: HRGMv2_0095_19_3
Type:
Location: 2972 - 4789 (-)
Gene ID: HRGMv2_0095_19_4
Type: TC
Location: 4915 - 6189 (+)
Gene ID: HRGMv2_0095_19_5
Type: pfam
Location: 6331 - 6819 (-)
Gene ID: HRGMv2_0095_19_6
Type: pfam
Location: 7042 - 7449 (-)
Gene ID: HRGMv2_0095_19_7
Type: CAZyme
Location: 7532 - 8482 (+)
Gene ID: HRGMv2_0095_19_8
Type:
Location: 8479 - 8748 (+)
Gene ID: HRGMv2_0095_19_9
Type: TC
Location: 8745 - 9584 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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