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Cluster: HRGMv2_0095_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0095_1 HRGMv2_0095_1_91 98357 99628 + 3.A.1.1.22
TC HRGMv2_0095_1 HRGMv2_0095_1_92 99748 101331 + 3.A.1.1.1
TC HRGMv2_0095_1 HRGMv2_0095_1_93 101356 102252 + 3.A.1.1.22
CAZyme HRGMv2_0095_1 HRGMv2_0095_1_94 102260 104209 + GH13_21
CAZyme HRGMv2_0095_1 HRGMv2_0095_1_95 104274 105902 + GH13_30
TF HRGMv2_0095_1 HRGMv2_0095_1_96 105983 106783 - MarR
TC HRGMv2_0095_1 HRGMv2_0095_1_97 106859 108613 - 2.A.15.1.1
Gene ID: HRGMv2_0095_1_91
Type: TC
Location: 98357 - 99628 (+)
Gene ID: HRGMv2_0095_1_92
Type: TC
Location: 99748 - 101331 (+)
Gene ID: HRGMv2_0095_1_93
Type: TC
Location: 101356 - 102252 (+)
Gene ID: HRGMv2_0095_1_94
Type: CAZyme
Location: 102260 - 104209 (+)
Gene ID: HRGMv2_0095_1_95
Type: CAZyme
Location: 104274 - 105902 (+)
Gene ID: HRGMv2_0095_1_96
Type: TF
Location: 105983 - 106783 (-)
Gene ID: HRGMv2_0095_1_97
Type: TC
Location: 106859 - 108613 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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