Cluster: HRGMv2_0095_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0095
- CGC Family ID: CGCFAM_05324
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0095_12 | HRGMv2_0095_12_5 | 3724 | 5541 | - | GH13_31 |
| NULL(UNKNOWN) | HRGMv2_0095_12 | HRGMv2_0095_12_6 | 5538 | 5780 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0095_12 | HRGMv2_0095_12_7 | 5793 | 7496 | + | Dak1 | Dak2 |
| TC | HRGMv2_0095_12 | HRGMv2_0095_12_8 | 7610 | 8539 | - | 3.A.1.1.28 |
| TC | HRGMv2_0095_12 | HRGMv2_0095_12_9 | 8541 | 9452 | - | 3.A.1.1.28 |
| TC | HRGMv2_0095_12 | HRGMv2_0095_12_10 | 9465 | 10715 | - | 3.A.1.1.21 |
Gene ID: HRGMv2_0095_12_5
Type: CAZyme
Location: 3724 - 5541 (-)
Type: CAZyme
Location: 3724 - 5541 (-)
Gene ID: HRGMv2_0095_12_6
Type:
Location: 5538 - 5780 (-)
Type:
Location: 5538 - 5780 (-)
Gene ID: HRGMv2_0095_12_7
Type: pfam
Location: 5793 - 7496 (+)
Type: pfam
Location: 5793 - 7496 (+)
Gene ID: HRGMv2_0095_12_8
Type: TC
Location: 7610 - 8539 (-)
Type: TC
Location: 7610 - 8539 (-)
Gene ID: HRGMv2_0095_12_9
Type: TC
Location: 8541 - 9452 (-)
Type: TC
Location: 8541 - 9452 (-)
Gene ID: HRGMv2_0095_12_10
Type: TC
Location: 9465 - 10715 (-)
Type: TC
Location: 9465 - 10715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Dermabacteraceae
Genus
Dermabacter
Species
Dermabacter vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.