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Cluster: HRGMv2_0095_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0095_11 HRGMv2_0095_11_57 68648 69589 + 3.A.1.15.4
TC HRGMv2_0095_11 HRGMv2_0095_11_58 69586 70371 + 3.A.1.15.8
TC HRGMv2_0095_11 HRGMv2_0095_11_59 70368 71300 + 3.A.1.15.8
TC HRGMv2_0095_11 HRGMv2_0095_11_60 71297 72163 + 3.A.1.15.8
TF HRGMv2_0095_11 HRGMv2_0095_11_61 72147 72854 - Fe_dep_repress
CAZyme HRGMv2_0095_11 HRGMv2_0095_11_62 72884 74407 - GH20
pfam HRGMv2_0095_11 HRGMv2_0095_11_63 74404 75078 - Hydrolase | HAD_2
pfam HRGMv2_0095_11 HRGMv2_0095_11_64 75075 76130 - Phosphodiest
CAZyme HRGMv2_0095_11 HRGMv2_0095_11_65 76127 79315 - GH38
Gene ID: HRGMv2_0095_11_57
Type: TC
Location: 68648 - 69589 (+)
Gene ID: HRGMv2_0095_11_58
Type: TC
Location: 69586 - 70371 (+)
Gene ID: HRGMv2_0095_11_59
Type: TC
Location: 70368 - 71300 (+)
Gene ID: HRGMv2_0095_11_60
Type: TC
Location: 71297 - 72163 (+)
Gene ID: HRGMv2_0095_11_61
Type: TF
Location: 72147 - 72854 (-)
Gene ID: HRGMv2_0095_11_62
Type: CAZyme
Location: 72884 - 74407 (-)
Gene ID: HRGMv2_0095_11_63
Type: pfam
Location: 74404 - 75078 (-)
Gene ID: HRGMv2_0095_11_64
Type: pfam
Location: 75075 - 76130 (-)
Gene ID: HRGMv2_0095_11_65
Type: CAZyme
Location: 76127 - 79315 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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