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Cluster: HRGMv2_0094_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0094_8 HRGMv2_0094_8_29 34986 36773 + 2.A.22.4.3
pfam HRGMv2_0094_8 HRGMv2_0094_8_30 36770 36886 + MaAIMP_sms
NULL(UNKNOWN) HRGMv2_0094_8 HRGMv2_0094_8_31 37249 38421 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0094_8 HRGMv2_0094_8_32 38951 39892 + 3.A.1.15.4
TC HRGMv2_0094_8 HRGMv2_0094_8_33 39889 40674 + 3.A.1.15.8
TC HRGMv2_0094_8 HRGMv2_0094_8_34 40671 41603 + 3.A.1.15.8
TC HRGMv2_0094_8 HRGMv2_0094_8_35 41600 42463 + 3.A.1.15.8
TF HRGMv2_0094_8 HRGMv2_0094_8_36 42450 43157 - Fe_dep_repress
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_37 43187 44710 - GH20
pfam HRGMv2_0094_8 HRGMv2_0094_8_38 44707 45369 - Hydrolase | HAD_2
pfam HRGMv2_0094_8 HRGMv2_0094_8_39 45378 46433 - Phosphodiest
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_40 46430 49624 - GH38
TC HRGMv2_0094_8 HRGMv2_0094_8_41 50018 51304 + 3.A.1.1.23
TC HRGMv2_0094_8 HRGMv2_0094_8_42 51310 52230 + 3.A.1.1.23
TC HRGMv2_0094_8 HRGMv2_0094_8_43 52243 53118 + 3.A.1.1.23
STP HRGMv2_0094_8 HRGMv2_0094_8_44 53219 54112 - NUDIX
TC HRGMv2_0094_8 HRGMv2_0094_8_45 54258 55556 + 3.A.1.1.23
TC HRGMv2_0094_8 HRGMv2_0094_8_46 55562 56482 + 3.A.1.1.23
TC HRGMv2_0094_8 HRGMv2_0094_8_47 56496 57362 + 3.A.1.1.23
STP HRGMv2_0094_8 HRGMv2_0094_8_48 57400 58788 - SBP_bac_1
TC HRGMv2_0094_8 HRGMv2_0094_8_49 58951 59892 - 3.A.1.1.39
TC HRGMv2_0094_8 HRGMv2_0094_8_50 59906 60790 - 3.A.1.1.36
STP HRGMv2_0094_8 HRGMv2_0094_8_51 60867 62147 - SBP_bac_1
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_52 62314 65376 - GH38
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_53 65466 66656 - GH5_18
TF HRGMv2_0094_8 HRGMv2_0094_8_54 66731 67756 + LacI
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_55 67753 69132 - GH125
CAZyme HRGMv2_0094_8 HRGMv2_0094_8_56 69353 70285 + GH18
STP HRGMv2_0094_8 HRGMv2_0094_8_57 70299 71687 + SBP_bac_1
TC HRGMv2_0094_8 HRGMv2_0094_8_58 71684 72628 + 3.A.1.1.38
TC HRGMv2_0094_8 HRGMv2_0094_8_59 72625 73509 + 3.A.1.1.6
Gene ID: HRGMv2_0094_8_29
Type: TC
Location: 34986 - 36773 (+)
Gene ID: HRGMv2_0094_8_30
Type: pfam
Location: 36770 - 36886 (+)
Gene ID: HRGMv2_0094_8_31
Type:
Location: 37249 - 38421 (+)
Gene ID: HRGMv2_0094_8_32
Type: TC
Location: 38951 - 39892 (+)
Gene ID: HRGMv2_0094_8_33
Type: TC
Location: 39889 - 40674 (+)
Gene ID: HRGMv2_0094_8_34
Type: TC
Location: 40671 - 41603 (+)
Gene ID: HRGMv2_0094_8_35
Type: TC
Location: 41600 - 42463 (+)
Gene ID: HRGMv2_0094_8_36
Type: TF
Location: 42450 - 43157 (-)
Gene ID: HRGMv2_0094_8_37
Type: CAZyme
Location: 43187 - 44710 (-)
Gene ID: HRGMv2_0094_8_38
Type: pfam
Location: 44707 - 45369 (-)
Gene ID: HRGMv2_0094_8_39
Type: pfam
Location: 45378 - 46433 (-)
Gene ID: HRGMv2_0094_8_40
Type: CAZyme
Location: 46430 - 49624 (-)
Gene ID: HRGMv2_0094_8_41
Type: TC
Location: 50018 - 51304 (+)
Gene ID: HRGMv2_0094_8_42
Type: TC
Location: 51310 - 52230 (+)
Gene ID: HRGMv2_0094_8_43
Type: TC
Location: 52243 - 53118 (+)
Gene ID: HRGMv2_0094_8_44
Type: STP
Location: 53219 - 54112 (-)
Gene ID: HRGMv2_0094_8_45
Type: TC
Location: 54258 - 55556 (+)
Gene ID: HRGMv2_0094_8_46
Type: TC
Location: 55562 - 56482 (+)
Gene ID: HRGMv2_0094_8_47
Type: TC
Location: 56496 - 57362 (+)
Gene ID: HRGMv2_0094_8_48
Type: STP
Location: 57400 - 58788 (-)
Gene ID: HRGMv2_0094_8_49
Type: TC
Location: 58951 - 59892 (-)
Gene ID: HRGMv2_0094_8_50
Type: TC
Location: 59906 - 60790 (-)
Gene ID: HRGMv2_0094_8_51
Type: STP
Location: 60867 - 62147 (-)
Gene ID: HRGMv2_0094_8_52
Type: CAZyme
Location: 62314 - 65376 (-)
Gene ID: HRGMv2_0094_8_53
Type: CAZyme
Location: 65466 - 66656 (-)
Gene ID: HRGMv2_0094_8_54
Type: TF
Location: 66731 - 67756 (+)
Gene ID: HRGMv2_0094_8_55
Type: CAZyme
Location: 67753 - 69132 (-)
Gene ID: HRGMv2_0094_8_56
Type: CAZyme
Location: 69353 - 70285 (+)
Gene ID: HRGMv2_0094_8_57
Type: STP
Location: 70299 - 71687 (+)
Gene ID: HRGMv2_0094_8_58
Type: TC
Location: 71684 - 72628 (+)
Gene ID: HRGMv2_0094_8_59
Type: TC
Location: 72625 - 73509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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