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Cluster: HRGMv2_0094_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0094_1 HRGMv2_0094_1_92 98358 99632 + 3.A.1.1.22
TC HRGMv2_0094_1 HRGMv2_0094_1_93 99752 101335 + 3.A.1.1.1
TC HRGMv2_0094_1 HRGMv2_0094_1_94 101359 102255 + 3.A.1.1.22
CAZyme HRGMv2_0094_1 HRGMv2_0094_1_95 102290 104212 + GH13_21
CAZyme HRGMv2_0094_1 HRGMv2_0094_1_96 104278 105906 + GH13_30
TF HRGMv2_0094_1 HRGMv2_0094_1_97 105987 106787 - MarR
TC HRGMv2_0094_1 HRGMv2_0094_1_98 106862 108616 - 2.A.15.1.1
Gene ID: HRGMv2_0094_1_92
Type: TC
Location: 98358 - 99632 (+)
Gene ID: HRGMv2_0094_1_93
Type: TC
Location: 99752 - 101335 (+)
Gene ID: HRGMv2_0094_1_94
Type: TC
Location: 101359 - 102255 (+)
Gene ID: HRGMv2_0094_1_95
Type: CAZyme
Location: 102290 - 104212 (+)
Gene ID: HRGMv2_0094_1_96
Type: CAZyme
Location: 104278 - 105906 (+)
Gene ID: HRGMv2_0094_1_97
Type: TF
Location: 105987 - 106787 (-)
Gene ID: HRGMv2_0094_1_98
Type: TC
Location: 106862 - 108616 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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