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Cluster: HRGMv2_0094_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0094_6 HRGMv2_0094_6_46 58954 59805 - CE1
TF HRGMv2_0094_6 HRGMv2_0094_6_47 60086 60478 + HTH_3
TC HRGMv2_0094_6 HRGMv2_0094_6_48 60527 62488 + 3.A.1.106.6
TC HRGMv2_0094_6 HRGMv2_0094_6_49 62485 64290 + 3.A.1.106.3
pfam HRGMv2_0094_6 HRGMv2_0094_6_50 64327 65514 - Gly_kinase
peptidase HRGMv2_0094_6 HRGMv2_0094_6_51 65625 66968 + M20.974
TC HRGMv2_0094_6 HRGMv2_0094_6_52 67025 68407 + 2.A.33.1.6
TC HRGMv2_0094_6 HRGMv2_0094_6_53 68576 69919 + 2.A.33.1.6
pfam HRGMv2_0094_6 HRGMv2_0094_6_54 69944 71557 - LssY_C
TC HRGMv2_0094_6 HRGMv2_0094_6_55 71648 72523 + 8.A.5.1.6
Gene ID: HRGMv2_0094_6_46
Type: CAZyme
Location: 58954 - 59805 (-)
Gene ID: HRGMv2_0094_6_47
Type: TF
Location: 60086 - 60478 (+)
Gene ID: HRGMv2_0094_6_48
Type: TC
Location: 60527 - 62488 (+)
Gene ID: HRGMv2_0094_6_49
Type: TC
Location: 62485 - 64290 (+)
Gene ID: HRGMv2_0094_6_50
Type: pfam
Location: 64327 - 65514 (-)
Gene ID: HRGMv2_0094_6_51
Type: peptidase
Location: 65625 - 66968 (+)
Gene ID: HRGMv2_0094_6_52
Type: TC
Location: 67025 - 68407 (+)
Gene ID: HRGMv2_0094_6_53
Type: TC
Location: 68576 - 69919 (+)
Gene ID: HRGMv2_0094_6_54
Type: pfam
Location: 69944 - 71557 (-)
Gene ID: HRGMv2_0094_6_55
Type: TC
Location: 71648 - 72523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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