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Cluster: HRGMv2_0094_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0094_3 HRGMv2_0094_3_55 61921 62604 + GT2
pfam HRGMv2_0094_3 HRGMv2_0094_3_56 62636 63547 - LytR_cpsA_psr
CAZyme HRGMv2_0094_3 HRGMv2_0094_3_57 64059 66098 + GT2
CAZyme HRGMv2_0094_3 HRGMv2_0094_3_58 66095 66982 + GT2
STP HRGMv2_0094_3 HRGMv2_0094_3_59 67104 68261 + Pyr_redox
CAZyme HRGMv2_0094_3 HRGMv2_0094_3_60 68286 70286 + GT2
TC HRGMv2_0094_3 HRGMv2_0094_3_61 70283 71191 + 3.A.1.103.1
TC HRGMv2_0094_3 HRGMv2_0094_3_62 71191 71934 + 3.A.1.103.5
Gene ID: HRGMv2_0094_3_55
Type: CAZyme
Location: 61921 - 62604 (+)
Gene ID: HRGMv2_0094_3_56
Type: pfam
Location: 62636 - 63547 (-)
Gene ID: HRGMv2_0094_3_57
Type: CAZyme
Location: 64059 - 66098 (+)
Gene ID: HRGMv2_0094_3_58
Type: CAZyme
Location: 66095 - 66982 (+)
Gene ID: HRGMv2_0094_3_59
Type: STP
Location: 67104 - 68261 (+)
Gene ID: HRGMv2_0094_3_60
Type: CAZyme
Location: 68286 - 70286 (+)
Gene ID: HRGMv2_0094_3_61
Type: TC
Location: 70283 - 71191 (+)
Gene ID: HRGMv2_0094_3_62
Type: TC
Location: 71191 - 71934 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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