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Cluster: HRGMv2_0092_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0092_4 HRGMv2_0092_4_72 76468 77589 - 3.A.1.1.23
TC HRGMv2_0092_4 HRGMv2_0092_4_73 77628 78929 - 3.A.1.1.3
TC HRGMv2_0092_4 HRGMv2_0092_4_74 78953 79840 - 3.A.1.1.3
TC HRGMv2_0092_4 HRGMv2_0092_4_75 79837 80820 - 3.A.1.1.7
pfam HRGMv2_0092_4 HRGMv2_0092_4_76 81009 81605 + dUTPase | DCD_N | DCD_C | DCD
NULL(UNKNOWN) HRGMv2_0092_4 HRGMv2_0092_4_77 81602 82753 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0092_4 HRGMv2_0092_4_78 82919 84655 + 2.A.1.3.33
pfam HRGMv2_0092_4 HRGMv2_0092_4_79 84690 84959 + DUF4235
STP HRGMv2_0092_4 HRGMv2_0092_4_80 85176 86231 + SBP_bac_1
TC HRGMv2_0092_4 HRGMv2_0092_4_81 86239 87909 + 3.A.1.19.3
TC HRGMv2_0092_4 HRGMv2_0092_4_82 87909 88919 + 3.A.1.19.3
pfam HRGMv2_0092_4 HRGMv2_0092_4_83 88880 90619 - PQQ_2
CAZyme HRGMv2_0092_4 HRGMv2_0092_4_84 90917 91759 + GT81
Gene ID: HRGMv2_0092_4_72
Type: TC
Location: 76468 - 77589 (-)
Gene ID: HRGMv2_0092_4_73
Type: TC
Location: 77628 - 78929 (-)
Gene ID: HRGMv2_0092_4_74
Type: TC
Location: 78953 - 79840 (-)
Gene ID: HRGMv2_0092_4_75
Type: TC
Location: 79837 - 80820 (-)
Gene ID: HRGMv2_0092_4_76
Type: pfam
Location: 81009 - 81605 (+)
Gene ID: HRGMv2_0092_4_77
Type:
Location: 81602 - 82753 (+)
Gene ID: HRGMv2_0092_4_78
Type: TC
Location: 82919 - 84655 (+)
Gene ID: HRGMv2_0092_4_79
Type: pfam
Location: 84690 - 84959 (+)
Gene ID: HRGMv2_0092_4_80
Type: STP
Location: 85176 - 86231 (+)
Gene ID: HRGMv2_0092_4_81
Type: TC
Location: 86239 - 87909 (+)
Gene ID: HRGMv2_0092_4_82
Type: TC
Location: 87909 - 88919 (+)
Gene ID: HRGMv2_0092_4_83
Type: pfam
Location: 88880 - 90619 (-)
Gene ID: HRGMv2_0092_4_84
Type: CAZyme
Location: 90917 - 91759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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