dbCAN Logo

Cluster: HRGMv2_0092_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0092_2 HRGMv2_0092_2_59 75598 76404 - 3.A.1.1.24
TC HRGMv2_0092_2 HRGMv2_0092_2_60 76407 77300 - 3.A.1.1.37
TC HRGMv2_0092_2 HRGMv2_0092_2_61 77374 78732 - 3.A.1.1.24
STP HRGMv2_0092_2 HRGMv2_0092_2_62 78759 79691 - PfkB
TF HRGMv2_0092_2 HRGMv2_0092_2_63 79771 80508 + HTH_DeoR
CAZyme HRGMv2_0092_2 HRGMv2_0092_2_64 80505 81875 + GH4
NULL(UNKNOWN) HRGMv2_0092_2 HRGMv2_0092_2_65 82136 82288 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0092_2 HRGMv2_0092_2_66 82340 83281 + CTP_transf_like | Flavokinase | FAD_syn
TC HRGMv2_0092_2 HRGMv2_0092_2_67 83450 85513 + 2.A.36.3.2
TC HRGMv2_0092_2 HRGMv2_0092_2_68 85515 87101 - 2.A.81.1.3
Gene ID: HRGMv2_0092_2_59
Type: TC
Location: 75598 - 76404 (-)
Gene ID: HRGMv2_0092_2_60
Type: TC
Location: 76407 - 77300 (-)
Gene ID: HRGMv2_0092_2_61
Type: TC
Location: 77374 - 78732 (-)
Gene ID: HRGMv2_0092_2_62
Type: STP
Location: 78759 - 79691 (-)
Gene ID: HRGMv2_0092_2_63
Type: TF
Location: 79771 - 80508 (+)
Gene ID: HRGMv2_0092_2_64
Type: CAZyme
Location: 80505 - 81875 (+)
Gene ID: HRGMv2_0092_2_65
Type:
Location: 82136 - 82288 (+)
Gene ID: HRGMv2_0092_2_66
Type: pfam
Location: 82340 - 83281 (+)
Gene ID: HRGMv2_0092_2_67
Type: TC
Location: 83450 - 85513 (+)
Gene ID: HRGMv2_0092_2_68
Type: TC
Location: 85515 - 87101 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List