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Cluster: HRGMv2_0085_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0085_7 HRGMv2_0085_7_19 17442 18929 + 2.A.103.1.7
peptidase HRGMv2_0085_7 HRGMv2_0085_7_20 18926 20347 + X52.001
TC HRGMv2_0085_7 HRGMv2_0085_7_21 20461 22335 + 9.B.106.2.2
pfam HRGMv2_0085_7 HRGMv2_0085_7_22 22408 23322 - YwiC
pfam HRGMv2_0085_7 HRGMv2_0085_7_23 23327 24196 - H2O2_YaaD
TC HRGMv2_0085_7 HRGMv2_0085_7_24 24409 25311 - 2.A.5.5.5
pfam HRGMv2_0085_7 HRGMv2_0085_7_25 25381 26484 - Ldh_1_N | Ldh_1_C
CAZyme HRGMv2_0085_7 HRGMv2_0085_7_26 26619 27935 - GH16_24
CAZyme HRGMv2_0085_7 HRGMv2_0085_7_27 28003 29529 - GH36
STP HRGMv2_0085_7 HRGMv2_0085_7_28 29601 30962 - SBP_bac_1
TC HRGMv2_0085_7 HRGMv2_0085_7_29 31032 31943 - 3.A.1.1.36
TC HRGMv2_0085_7 HRGMv2_0085_7_30 31965 32981 - 3.A.1.1.20
Gene ID: HRGMv2_0085_7_19
Type: TC
Location: 17442 - 18929 (+)
Gene ID: HRGMv2_0085_7_20
Type: peptidase
Location: 18926 - 20347 (+)
Gene ID: HRGMv2_0085_7_21
Type: TC
Location: 20461 - 22335 (+)
Gene ID: HRGMv2_0085_7_22
Type: pfam
Location: 22408 - 23322 (-)
Gene ID: HRGMv2_0085_7_23
Type: pfam
Location: 23327 - 24196 (-)
Gene ID: HRGMv2_0085_7_24
Type: TC
Location: 24409 - 25311 (-)
Gene ID: HRGMv2_0085_7_25
Type: pfam
Location: 25381 - 26484 (-)
Gene ID: HRGMv2_0085_7_26
Type: CAZyme
Location: 26619 - 27935 (-)
Gene ID: HRGMv2_0085_7_27
Type: CAZyme
Location: 28003 - 29529 (-)
Gene ID: HRGMv2_0085_7_28
Type: STP
Location: 29601 - 30962 (-)
Gene ID: HRGMv2_0085_7_29
Type: TC
Location: 31032 - 31943 (-)
Gene ID: HRGMv2_0085_7_30
Type: TC
Location: 31965 - 32981 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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