dbCAN Logo

Cluster: HRGMv2_0085_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0085_5 HRGMv2_0085_5_85 103886 104479 - 9.B.18.1.3
pfam HRGMv2_0085_5 HRGMv2_0085_5_86 104486 105706 - Aminotran_1_2 | DegT_DnrJ_EryC1
TC HRGMv2_0085_5 HRGMv2_0085_5_87 105834 107621 + 9.B.18.2.1
pfam HRGMv2_0085_5 HRGMv2_0085_5_88 107795 108787 + LicD
CAZyme HRGMv2_0085_5 HRGMv2_0085_5_89 108771 109757 + GT2
TF HRGMv2_0085_5 HRGMv2_0085_5_90 109829 111145 - SirB
CAZyme HRGMv2_0085_5 HRGMv2_0085_5_91 111318 112343 - GT2
pfam HRGMv2_0085_5 HRGMv2_0085_5_92 112436 114028 + Wzy_C
CAZyme HRGMv2_0085_5 HRGMv2_0085_5_93 114040 115158 + GT4
pfam HRGMv2_0085_5 HRGMv2_0085_5_94 115306 116004 - DUF1919
CAZyme HRGMv2_0085_5 HRGMv2_0085_5_95 116010 117080 - GT2
Gene ID: HRGMv2_0085_5_85
Type: TC
Location: 103886 - 104479 (-)
Gene ID: HRGMv2_0085_5_86
Type: pfam
Location: 104486 - 105706 (-)
Gene ID: HRGMv2_0085_5_87
Type: TC
Location: 105834 - 107621 (+)
Gene ID: HRGMv2_0085_5_88
Type: pfam
Location: 107795 - 108787 (+)
Gene ID: HRGMv2_0085_5_89
Type: CAZyme
Location: 108771 - 109757 (+)
Gene ID: HRGMv2_0085_5_90
Type: TF
Location: 109829 - 111145 (-)
Gene ID: HRGMv2_0085_5_91
Type: CAZyme
Location: 111318 - 112343 (-)
Gene ID: HRGMv2_0085_5_92
Type: pfam
Location: 112436 - 114028 (+)
Gene ID: HRGMv2_0085_5_93
Type: CAZyme
Location: 114040 - 115158 (+)
Gene ID: HRGMv2_0085_5_94
Type: pfam
Location: 115306 - 116004 (-)
Gene ID: HRGMv2_0085_5_95
Type: CAZyme
Location: 116010 - 117080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List