Cluster: HRGMv2_0085_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0085
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0085_4 | HRGMv2_0085_4_77 | 98519 | 101368 | + | 3.A.5.2.2 |
| CAZyme | HRGMv2_0085_4 | HRGMv2_0085_4_78 | 102020 | 103999 | - | GH13_31 |
| CAZyme | HRGMv2_0085_4 | HRGMv2_0085_4_79 | 104010 | 106238 | - | GH31_7 |
| STP | HRGMv2_0085_4 | HRGMv2_0085_4_80 | 106355 | 107620 | - | SBP_bac_1 |
| TC | HRGMv2_0085_4 | HRGMv2_0085_4_81 | 107654 | 108475 | - | 3.A.1.1.36 |
| TC | HRGMv2_0085_4 | HRGMv2_0085_4_82 | 108468 | 109217 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_0085_4_77
Type: TC
Location: 98519 - 101368 (+)
Type: TC
Location: 98519 - 101368 (+)
Gene ID: HRGMv2_0085_4_78
Type: CAZyme
Location: 102020 - 103999 (-)
Type: CAZyme
Location: 102020 - 103999 (-)
Gene ID: HRGMv2_0085_4_79
Type: CAZyme
Location: 104010 - 106238 (-)
Type: CAZyme
Location: 104010 - 106238 (-)
Gene ID: HRGMv2_0085_4_80
Type: STP
Location: 106355 - 107620 (-)
Type: STP
Location: 106355 - 107620 (-)
Gene ID: HRGMv2_0085_4_81
Type: TC
Location: 107654 - 108475 (-)
Type: TC
Location: 107654 - 108475 (-)
Gene ID: HRGMv2_0085_4_82
Type: TC
Location: 108468 - 109217 (-)
Type: TC
Location: 108468 - 109217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp958428545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.