Cluster: HRGMv2_0085_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0085
- CGC Family ID: CGCFAM_05116
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_75 | 92056 | 93669 | + | 3.A.1.120.3 |
| pfam | HRGMv2_0085_1 | HRGMv2_0085_1_76 | 93783 | 95024 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0085_1 | HRGMv2_0085_1_77 | 95136 | 96365 | + | GT5 |
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_78 | 96414 | 97196 | + | 3.A.1.23.8 |
| pfam | HRGMv2_0085_1 | HRGMv2_0085_1_79 | 97315 | 97734 | + | NfeD |
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_80 | 97856 | 98914 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_0085_1_75
Type: TC
Location: 92056 - 93669 (+)
Type: TC
Location: 92056 - 93669 (+)
Gene ID: HRGMv2_0085_1_76
Type: pfam
Location: 93783 - 95024 (-)
Type: pfam
Location: 93783 - 95024 (-)
Gene ID: HRGMv2_0085_1_77
Type: CAZyme
Location: 95136 - 96365 (+)
Type: CAZyme
Location: 95136 - 96365 (+)
Gene ID: HRGMv2_0085_1_78
Type: TC
Location: 96414 - 97196 (+)
Type: TC
Location: 96414 - 97196 (+)
Gene ID: HRGMv2_0085_1_79
Type: pfam
Location: 97315 - 97734 (+)
Type: pfam
Location: 97315 - 97734 (+)
Gene ID: HRGMv2_0085_1_80
Type: TC
Location: 97856 - 98914 (+)
Type: TC
Location: 97856 - 98914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp958428545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.