Cluster: HRGMv2_0085_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0085
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0085_18 | HRGMv2_0085_18_10 | 9398 | 11557 | - | GH77 |
| pfam | HRGMv2_0085_18 | HRGMv2_0085_18_11 | 11622 | 12521 | + | Acyl_CoA_thio | 4HBT_3 | 4HBT_3C |
| NULL(UNKNOWN) | HRGMv2_0085_18 | HRGMv2_0085_18_12 | 12887 | 13084 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0085_18 | HRGMv2_0085_18_13 | 13102 | 14784 | - | 3.A.1.120.6 |
Gene ID: HRGMv2_0085_18_10
Type: CAZyme
Location: 9398 - 11557 (-)
Type: CAZyme
Location: 9398 - 11557 (-)
Gene ID: HRGMv2_0085_18_11
Type: pfam
Location: 11622 - 12521 (+)
Type: pfam
Location: 11622 - 12521 (+)
Gene ID: HRGMv2_0085_18_12
Type:
Location: 12887 - 13084 (-)
Type:
Location: 12887 - 13084 (-)
Gene ID: HRGMv2_0085_18_13
Type: TC
Location: 13102 - 14784 (-)
Type: TC
Location: 13102 - 14784 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp958428545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.