Cluster: HRGMv2_0085_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0085
- CGC Family ID: CGCFAM_09488
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0085_12 | HRGMv2_0085_12_8 | 10162 | 11499 | + | 2.A.1.52.3 |
| TC | HRGMv2_0085_12 | HRGMv2_0085_12_9 | 12084 | 13148 | + | 2.A.109.1.2 |
| pfam | HRGMv2_0085_12 | HRGMv2_0085_12_10 | 13336 | 14406 | - | Asparaginase | Asparaginase_C |
| CAZyme | HRGMv2_0085_12 | HRGMv2_0085_12_11 | 14994 | 19277 | + | GH29 |
| CAZyme | HRGMv2_0085_12 | HRGMv2_0085_12_12 | 19305 | 23630 | + | CBM32 | CBM32 | GH20 |
Gene ID: HRGMv2_0085_12_8
Type: TC
Location: 10162 - 11499 (+)
Type: TC
Location: 10162 - 11499 (+)
Gene ID: HRGMv2_0085_12_9
Type: TC
Location: 12084 - 13148 (+)
Type: TC
Location: 12084 - 13148 (+)
Gene ID: HRGMv2_0085_12_10
Type: pfam
Location: 13336 - 14406 (-)
Type: pfam
Location: 13336 - 14406 (-)
Gene ID: HRGMv2_0085_12_11
Type: CAZyme
Location: 14994 - 19277 (+)
Type: CAZyme
Location: 14994 - 19277 (+)
Gene ID: HRGMv2_0085_12_12
Type: CAZyme
Location: 19305 - 23630 (+)
Type: CAZyme
Location: 19305 - 23630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp958428545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.