Cluster: HRGMv2_0085_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0085
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0085_1 | HRGMv2_0085_1_1 | 256 | 2007 | - | GH13_44 |
| TF | HRGMv2_0085_1 | HRGMv2_0085_1_2 | 2249 | 3265 | - | LacI |
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_3 | 3520 | 4767 | + | 3.A.1.1.27 |
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_4 | 4891 | 6303 | + | 3.A.1.1.27 |
| TC | HRGMv2_0085_1 | HRGMv2_0085_1_5 | 6303 | 7193 | + | 3.A.1.1.27 |
Gene ID: HRGMv2_0085_1_1
Type: CAZyme
Location: 256 - 2007 (-)
Type: CAZyme
Location: 256 - 2007 (-)
Gene ID: HRGMv2_0085_1_2
Type: TF
Location: 2249 - 3265 (-)
Type: TF
Location: 2249 - 3265 (-)
Gene ID: HRGMv2_0085_1_3
Type: TC
Location: 3520 - 4767 (+)
Type: TC
Location: 3520 - 4767 (+)
Gene ID: HRGMv2_0085_1_4
Type: TC
Location: 4891 - 6303 (+)
Type: TC
Location: 4891 - 6303 (+)
Gene ID: HRGMv2_0085_1_5
Type: TC
Location: 6303 - 7193 (+)
Type: TC
Location: 6303 - 7193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp958428545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.