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Cluster: HRGMv2_0081_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0081_17 HRGMv2_0081_17_13 18964 19848 + 9.B.1.1.5
pfam HRGMv2_0081_17 HRGMv2_0081_17_14 19895 20842 + Aldose_epim | Aldose_epim
pfam HRGMv2_0081_17 HRGMv2_0081_17_15 20986 23802 - FtsX | FtsX
TC HRGMv2_0081_17 HRGMv2_0081_17_16 23803 24552 - 3.A.1.125.3
NULL(UNKNOWN) HRGMv2_0081_17 HRGMv2_0081_17_17 24619 26160 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0081_17 HRGMv2_0081_17_18 26161 26859 - 3.A.1.125.3
pfam HRGMv2_0081_17 HRGMv2_0081_17_19 26992 28398 + HisKA_3
TF HRGMv2_0081_17 HRGMv2_0081_17_20 28379 29065 + GerE
CAZyme HRGMv2_0081_17 HRGMv2_0081_17_21 29133 30314 - CE9
pfam HRGMv2_0081_17 HRGMv2_0081_17_22 30557 31360 + NTP_transferase | NTP_transf_3
TC HRGMv2_0081_17 HRGMv2_0081_17_23 31548 32843 + 3.A.1.1.48
TC HRGMv2_0081_17 HRGMv2_0081_17_24 33100 34107 + 3.A.1.1.48
TC HRGMv2_0081_17 HRGMv2_0081_17_25 34100 35032 + 3.A.1.1.48
Gene ID: HRGMv2_0081_17_13
Type: TC
Location: 18964 - 19848 (+)
Gene ID: HRGMv2_0081_17_14
Type: pfam
Location: 19895 - 20842 (+)
Gene ID: HRGMv2_0081_17_15
Type: pfam
Location: 20986 - 23802 (-)
Gene ID: HRGMv2_0081_17_16
Type: TC
Location: 23803 - 24552 (-)
Gene ID: HRGMv2_0081_17_17
Type:
Location: 24619 - 26160 (-)
Gene ID: HRGMv2_0081_17_18
Type: TC
Location: 26161 - 26859 (-)
Gene ID: HRGMv2_0081_17_19
Type: pfam
Location: 26992 - 28398 (+)
Gene ID: HRGMv2_0081_17_20
Type: TF
Location: 28379 - 29065 (+)
Gene ID: HRGMv2_0081_17_21
Type: CAZyme
Location: 29133 - 30314 (-)
Gene ID: HRGMv2_0081_17_22
Type: pfam
Location: 30557 - 31360 (+)
Gene ID: HRGMv2_0081_17_23
Type: TC
Location: 31548 - 32843 (+)
Gene ID: HRGMv2_0081_17_24
Type: TC
Location: 33100 - 34107 (+)
Gene ID: HRGMv2_0081_17_25
Type: TC
Location: 34100 - 35032 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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