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Cluster: HRGMv2_0073_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0073_9 HRGMv2_0073_9_11 9285 10607 + 2.A.120.1.1
pfam HRGMv2_0073_9 HRGMv2_0073_9_12 10609 11208 - DNA_binding_1
pfam HRGMv2_0073_9 HRGMv2_0073_9_13 11177 11770 - Protoglobin
TC HRGMv2_0073_9 HRGMv2_0073_9_14 11991 13952 + 2.A.36.3.1
NULL(UNKNOWN) HRGMv2_0073_9 HRGMv2_0073_9_15 14031 14603 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0073_9 HRGMv2_0073_9_16 14823 18248 + 3.A.1.122.13
peptidase HRGMv2_0073_9 HRGMv2_0073_9_17 18361 18945 + C56.UNW
pfam HRGMv2_0073_9 HRGMv2_0073_9_18 18985 19899 + TatD_DNase
CAZyme HRGMv2_0073_9 HRGMv2_0073_9_19 20135 21304 + GH23
CAZyme HRGMv2_0073_9 HRGMv2_0073_9_20 21402 22814 + GH23
Gene ID: HRGMv2_0073_9_11
Type: TC
Location: 9285 - 10607 (+)
Gene ID: HRGMv2_0073_9_12
Type: pfam
Location: 10609 - 11208 (-)
Gene ID: HRGMv2_0073_9_13
Type: pfam
Location: 11177 - 11770 (-)
Gene ID: HRGMv2_0073_9_14
Type: TC
Location: 11991 - 13952 (+)
Gene ID: HRGMv2_0073_9_15
Type:
Location: 14031 - 14603 (-)
Gene ID: HRGMv2_0073_9_16
Type: TC
Location: 14823 - 18248 (+)
Gene ID: HRGMv2_0073_9_17
Type: peptidase
Location: 18361 - 18945 (+)
Gene ID: HRGMv2_0073_9_18
Type: pfam
Location: 18985 - 19899 (+)
Gene ID: HRGMv2_0073_9_19
Type: CAZyme
Location: 20135 - 21304 (+)
Gene ID: HRGMv2_0073_9_20
Type: CAZyme
Location: 21402 - 22814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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