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Cluster: HRGMv2_0073_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0073_7 HRGMv2_0073_7_2 5109 6665 - 3.B.1.1.5
sulfatase HRGMv2_0073_7 HRGMv2_0073_7_3 6662 8455 - S1_37
pfam HRGMv2_0073_7 HRGMv2_0073_7_4 8442 9326 - BPL_C | BPL_LplA_LipB
TC HRGMv2_0073_7 HRGMv2_0073_7_5 9645 11327 + 3.A.1.120.6
pfam HRGMv2_0073_7 HRGMv2_0073_7_6 11601 11885 + PTS_EIIB
CAZyme HRGMv2_0073_7 HRGMv2_0073_7_7 11927 14077 + GH77
TC HRGMv2_0073_7 HRGMv2_0073_7_8 14175 14642 - 4.A.1.2.6
TC HRGMv2_0073_7 HRGMv2_0073_7_9 14639 14869 - 4.A.1.1.1
pfam HRGMv2_0073_7 HRGMv2_0073_7_10 14962 16227 - MFS_3 | MFS_1 | MFS_1
pfam HRGMv2_0073_7 HRGMv2_0073_7_11 16244 17122 - S6PP | Hydrolase_3
CAZyme HRGMv2_0073_7 HRGMv2_0073_7_12 17251 19710 + GH3
CAZyme HRGMv2_0073_7 HRGMv2_0073_7_13 20054 21064 + GT2
pfam HRGMv2_0073_7 HRGMv2_0073_7_14 21074 21592 - Acetyltransf_1 | Acetyltransf_3
STP HRGMv2_0073_7 HRGMv2_0073_7_15 21941 23083 + Pyr_redox
TC HRGMv2_0073_7 HRGMv2_0073_7_16 23100 24038 + 2.A.69.3.1
TC HRGMv2_0073_7 HRGMv2_0073_7_17 24214 25800 + 2.A.22.4.3
Gene ID: HRGMv2_0073_7_2
Type: TC
Location: 5109 - 6665 (-)
Gene ID: HRGMv2_0073_7_3
Type: sulfatase
Location: 6662 - 8455 (-)
Gene ID: HRGMv2_0073_7_4
Type: pfam
Location: 8442 - 9326 (-)
Gene ID: HRGMv2_0073_7_5
Type: TC
Location: 9645 - 11327 (+)
Gene ID: HRGMv2_0073_7_6
Type: pfam
Location: 11601 - 11885 (+)
Gene ID: HRGMv2_0073_7_7
Type: CAZyme
Location: 11927 - 14077 (+)
Gene ID: HRGMv2_0073_7_8
Type: TC
Location: 14175 - 14642 (-)
Gene ID: HRGMv2_0073_7_9
Type: TC
Location: 14639 - 14869 (-)
Gene ID: HRGMv2_0073_7_10
Type: pfam
Location: 14962 - 16227 (-)
Gene ID: HRGMv2_0073_7_11
Type: pfam
Location: 16244 - 17122 (-)
Gene ID: HRGMv2_0073_7_12
Type: CAZyme
Location: 17251 - 19710 (+)
Gene ID: HRGMv2_0073_7_13
Type: CAZyme
Location: 20054 - 21064 (+)
Gene ID: HRGMv2_0073_7_14
Type: pfam
Location: 21074 - 21592 (-)
Gene ID: HRGMv2_0073_7_15
Type: STP
Location: 21941 - 23083 (+)
Gene ID: HRGMv2_0073_7_16
Type: TC
Location: 23100 - 24038 (+)
Gene ID: HRGMv2_0073_7_17
Type: TC
Location: 24214 - 25800 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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