Cluster: HRGMv2_0073_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0073
- CGC Family ID: CGCFAM_02107
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0073_3 | HRGMv2_0073_3_28 | 40688 | 41416 | - | 3.A.1.132.6 |
| TF | HRGMv2_0073_3 | HRGMv2_0073_3_29 | 41435 | 41797 | - | GntR |
| CAZyme | HRGMv2_0073_3 | HRGMv2_0073_3_30 | 41968 | 44334 | - | GT35 |
| NULL(UNKNOWN) | HRGMv2_0073_3 | HRGMv2_0073_3_31 | 45013 | 45576 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0073_3 | HRGMv2_0073_3_32 | 45777 | 46406 | - | 2.A.95.1.6 |
| pfam | HRGMv2_0073_3 | HRGMv2_0073_3_33 | 46403 | 47251 | - | PHP |
| TC | HRGMv2_0073_3 | HRGMv2_0073_3_34 | 47491 | 48951 | + | 2.A.3.1.8 |
Gene ID: HRGMv2_0073_3_28
Type: TC
Location: 40688 - 41416 (-)
Type: TC
Location: 40688 - 41416 (-)
Gene ID: HRGMv2_0073_3_29
Type: TF
Location: 41435 - 41797 (-)
Type: TF
Location: 41435 - 41797 (-)
Gene ID: HRGMv2_0073_3_30
Type: CAZyme
Location: 41968 - 44334 (-)
Type: CAZyme
Location: 41968 - 44334 (-)
Gene ID: HRGMv2_0073_3_31
Type:
Location: 45013 - 45576 (-)
Type:
Location: 45013 - 45576 (-)
Gene ID: HRGMv2_0073_3_32
Type: TC
Location: 45777 - 46406 (-)
Type: TC
Location: 45777 - 46406 (-)
Gene ID: HRGMv2_0073_3_33
Type: pfam
Location: 46403 - 47251 (-)
Type: pfam
Location: 46403 - 47251 (-)
Gene ID: HRGMv2_0073_3_34
Type: TC
Location: 47491 - 48951 (+)
Type: TC
Location: 47491 - 48951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp000278725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.