Cluster: HRGMv2_0073_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0073
- CGC Family ID: CGCFAM_05414
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0073_16 | HRGMv2_0073_16_17 | 17889 | 18674 | + | GT2 |
| pfam | HRGMv2_0073_16 | HRGMv2_0073_16_18 | 18671 | 19036 | - | RbpA |
| pfam | HRGMv2_0073_16 | HRGMv2_0073_16_19 | 19241 | 19942 | + | PAP2 | PAP2_3 |
| TC | HRGMv2_0073_16 | HRGMv2_0073_16_20 | 19955 | 21490 | + | 3.A.9.1.1 |
Gene ID: HRGMv2_0073_16_17
Type: CAZyme
Location: 17889 - 18674 (+)
Type: CAZyme
Location: 17889 - 18674 (+)
Gene ID: HRGMv2_0073_16_18
Type: pfam
Location: 18671 - 19036 (-)
Type: pfam
Location: 18671 - 19036 (-)
Gene ID: HRGMv2_0073_16_19
Type: pfam
Location: 19241 - 19942 (+)
Type: pfam
Location: 19241 - 19942 (+)
Gene ID: HRGMv2_0073_16_20
Type: TC
Location: 19955 - 21490 (+)
Type: TC
Location: 19955 - 21490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp000278725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.