Cluster: HRGMv2_0073_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0073
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0073_1 | HRGMv2_0073_1_22 | 22255 | 22989 | - | 2.A.7.2.1 |
| NULL(UNKNOWN) | HRGMv2_0073_1 | HRGMv2_0073_1_23 | 23273 | 24328 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0073_1 | HRGMv2_0073_1_24 | 24473 | 25462 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0073_1 | HRGMv2_0073_1_25 | 25651 | 27075 | + | GH13_5 |
Gene ID: HRGMv2_0073_1_22
Type: TC
Location: 22255 - 22989 (-)
Type: TC
Location: 22255 - 22989 (-)
Gene ID: HRGMv2_0073_1_23
Type:
Location: 23273 - 24328 (+)
Type:
Location: 23273 - 24328 (+)
Gene ID: HRGMv2_0073_1_24
Type:
Location: 24473 - 25462 (+)
Type:
Location: 24473 - 25462 (+)
Gene ID: HRGMv2_0073_1_25
Type: CAZyme
Location: 25651 - 27075 (+)
Type: CAZyme
Location: 25651 - 27075 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp000278725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.