dbCAN Logo

Cluster: HRGMv2_0063_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0063_6 HRGMv2_0063_6_48 61899 63191 - 2.A.1.6.6
CAZyme HRGMv2_0063_6 HRGMv2_0063_6_49 63417 64412 + GT2
CAZyme HRGMv2_0063_6 HRGMv2_0063_6_50 64445 65440 + GT2
pfam HRGMv2_0063_6 HRGMv2_0063_6_51 65501 66628 + Acyl_transf_3
NULL(UNKNOWN) HRGMv2_0063_6 HRGMv2_0063_6_52 66703 68112 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0063_6 HRGMv2_0063_6_53 68215 69090 - GT2
pfam HRGMv2_0063_6 HRGMv2_0063_6_54 69141 69518 - DUF2304
CAZyme HRGMv2_0063_6 HRGMv2_0063_6_55 69521 70252 - GT2
Gene ID: HRGMv2_0063_6_48
Type: TC
Location: 61899 - 63191 (-)
Gene ID: HRGMv2_0063_6_49
Type: CAZyme
Location: 63417 - 64412 (+)
Gene ID: HRGMv2_0063_6_50
Type: CAZyme
Location: 64445 - 65440 (+)
Gene ID: HRGMv2_0063_6_51
Type: pfam
Location: 65501 - 66628 (+)
Gene ID: HRGMv2_0063_6_52
Type:
Location: 66703 - 68112 (-)
Gene ID: HRGMv2_0063_6_53
Type: CAZyme
Location: 68215 - 69090 (-)
Gene ID: HRGMv2_0063_6_54
Type: pfam
Location: 69141 - 69518 (-)
Gene ID: HRGMv2_0063_6_55
Type: CAZyme
Location: 69521 - 70252 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List