Cluster: HRGMv2_0063_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0063_2 | HRGMv2_0063_2_170 | 194960 | 197068 | + | GT51 |
| pfam | HRGMv2_0063_2 | HRGMv2_0063_2_171 | 197095 | 198108 | + | Metallophos |
| TC | HRGMv2_0063_2 | HRGMv2_0063_2_172 | 198108 | 200162 | + | 3.A.1.106.9 |
| TC | HRGMv2_0063_2 | HRGMv2_0063_2_173 | 200162 | 202024 | + | 3.A.1.106.3 |
Gene ID: HRGMv2_0063_2_170
Type: CAZyme
Location: 194960 - 197068 (+)
Type: CAZyme
Location: 194960 - 197068 (+)
Gene ID: HRGMv2_0063_2_171
Type: pfam
Location: 197095 - 198108 (+)
Type: pfam
Location: 197095 - 198108 (+)
Gene ID: HRGMv2_0063_2_172
Type: TC
Location: 198108 - 200162 (+)
Type: TC
Location: 198108 - 200162 (+)
Gene ID: HRGMv2_0063_2_173
Type: TC
Location: 200162 - 202024 (+)
Type: TC
Location: 200162 - 202024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.