Cluster: HRGMv2_0063_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0063_1 | HRGMv2_0063_1_122 | 168698 | 170275 | - | 9.B.76.1.1 |
| pfam | HRGMv2_0063_1 | HRGMv2_0063_1_123 | 170900 | 172363 | - | PK | PK_C |
| pfam | HRGMv2_0063_1 | HRGMv2_0063_1_124 | 172862 | 173434 | + | Flavodoxin_5 |
| CAZyme | HRGMv2_0063_1 | HRGMv2_0063_1_125 | 174108 | 175985 | + | GH25 |
Gene ID: HRGMv2_0063_1_122
Type: TC
Location: 168698 - 170275 (-)
Type: TC
Location: 168698 - 170275 (-)
Gene ID: HRGMv2_0063_1_123
Type: pfam
Location: 170900 - 172363 (-)
Type: pfam
Location: 170900 - 172363 (-)
Gene ID: HRGMv2_0063_1_124
Type: pfam
Location: 172862 - 173434 (+)
Type: pfam
Location: 172862 - 173434 (+)
Gene ID: HRGMv2_0063_1_125
Type: CAZyme
Location: 174108 - 175985 (+)
Type: CAZyme
Location: 174108 - 175985 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.