Cluster: HRGMv2_0063_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0063_1 | HRGMv2_0063_1_65 | 89994 | 91109 | + | CE4 |
| pfam | HRGMv2_0063_1 | HRGMv2_0063_1_66 | 91344 | 92084 | + | DSBA | Thioredoxin_4 |
| pfam | HRGMv2_0063_1 | HRGMv2_0063_1_67 | 92354 | 92935 | + | Excalibur |
| CAZyme | HRGMv2_0063_1 | HRGMv2_0063_1_68 | 93080 | 94030 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_0063_1 | HRGMv2_0063_1_69 | 94241 | 94513 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0063_1 | HRGMv2_0063_1_70 | 94561 | 95952 | - | Glutaminase |
| TC | HRGMv2_0063_1 | HRGMv2_0063_1_71 | 96194 | 97159 | - | 2.A.4.1.4 |
Gene ID: HRGMv2_0063_1_65
Type: CAZyme
Location: 89994 - 91109 (+)
Type: CAZyme
Location: 89994 - 91109 (+)
Gene ID: HRGMv2_0063_1_66
Type: pfam
Location: 91344 - 92084 (+)
Type: pfam
Location: 91344 - 92084 (+)
Gene ID: HRGMv2_0063_1_67
Type: pfam
Location: 92354 - 92935 (+)
Type: pfam
Location: 92354 - 92935 (+)
Gene ID: HRGMv2_0063_1_68
Type: CAZyme
Location: 93080 - 94030 (-)
Type: CAZyme
Location: 93080 - 94030 (-)
Gene ID: HRGMv2_0063_1_69
Type:
Location: 94241 - 94513 (-)
Type:
Location: 94241 - 94513 (-)
Gene ID: HRGMv2_0063_1_70
Type: pfam
Location: 94561 - 95952 (-)
Type: pfam
Location: 94561 - 95952 (-)
Gene ID: HRGMv2_0063_1_71
Type: TC
Location: 96194 - 97159 (-)
Type: TC
Location: 96194 - 97159 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.