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Cluster: HRGMv2_0063_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0063_24 HRGMv2_0063_24_4 5185 6717 - GT87
CAZyme HRGMv2_0063_24 HRGMv2_0063_24_5 6714 8102 - GT87
pfam HRGMv2_0063_24 HRGMv2_0063_24_6 8449 11490 + Cu-oxidase_2 | Cu-oxidase_3 | Cupredoxin_1
CAZyme HRGMv2_0063_24 HRGMv2_0063_24_7 12004 12618 + GH23
pfam HRGMv2_0063_24 HRGMv2_0063_24_8 12807 14018 - p450
TC HRGMv2_0063_24 HRGMv2_0063_24_9 14414 15859 - 2.A.1.1.53
TC HRGMv2_0063_24 HRGMv2_0063_24_10 16085 17086 - 8.A.5.1.6
TC HRGMv2_0063_24 HRGMv2_0063_24_11 17123 18877 - 3.A.1.106.14
TC HRGMv2_0063_24 HRGMv2_0063_24_12 18870 20672 - 3.A.1.106.1
pfam HRGMv2_0063_24 HRGMv2_0063_24_13 21253 22158 + MTHFR
pfam HRGMv2_0063_24 HRGMv2_0063_24_14 22306 24633 + Meth_synt_2 | Meth_synt_1
TC HRGMv2_0063_24 HRGMv2_0063_24_15 25191 26630 + 2.A.1.4.3
Gene ID: HRGMv2_0063_24_4
Type: CAZyme
Location: 5185 - 6717 (-)
Gene ID: HRGMv2_0063_24_5
Type: CAZyme
Location: 6714 - 8102 (-)
Gene ID: HRGMv2_0063_24_6
Type: pfam
Location: 8449 - 11490 (+)
Gene ID: HRGMv2_0063_24_7
Type: CAZyme
Location: 12004 - 12618 (+)
Gene ID: HRGMv2_0063_24_8
Type: pfam
Location: 12807 - 14018 (-)
Gene ID: HRGMv2_0063_24_9
Type: TC
Location: 14414 - 15859 (-)
Gene ID: HRGMv2_0063_24_10
Type: TC
Location: 16085 - 17086 (-)
Gene ID: HRGMv2_0063_24_11
Type: TC
Location: 17123 - 18877 (-)
Gene ID: HRGMv2_0063_24_12
Type: TC
Location: 18870 - 20672 (-)
Gene ID: HRGMv2_0063_24_13
Type: pfam
Location: 21253 - 22158 (+)
Gene ID: HRGMv2_0063_24_14
Type: pfam
Location: 22306 - 24633 (+)
Gene ID: HRGMv2_0063_24_15
Type: TC
Location: 25191 - 26630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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