Cluster: HRGMv2_0063_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0063_17 | HRGMv2_0063_17_13 | 14966 | 16066 | - | GT28 |
| TC | HRGMv2_0063_17 | HRGMv2_0063_17_14 | 16241 | 18208 | - | 2.A.103.1.4 |
| pfam | HRGMv2_0063_17 | HRGMv2_0063_17_15 | 18384 | 19973 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0063_17 | HRGMv2_0063_17_16 | 19973 | 21178 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0063_17_13
Type: CAZyme
Location: 14966 - 16066 (-)
Type: CAZyme
Location: 14966 - 16066 (-)
Gene ID: HRGMv2_0063_17_14
Type: TC
Location: 16241 - 18208 (-)
Type: TC
Location: 16241 - 18208 (-)
Gene ID: HRGMv2_0063_17_15
Type: pfam
Location: 18384 - 19973 (-)
Type: pfam
Location: 18384 - 19973 (-)
Gene ID: HRGMv2_0063_17_16
Type: TC
Location: 19973 - 21178 (-)
Type: TC
Location: 19973 - 21178 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.