Cluster: HRGMv2_0063_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: HRGMv2_0063
- CGC Family ID: CGCFAM_00484
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0063_8 | HRGMv2_0063_8_1 | 164 | 3244 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0063_8 | HRGMv2_0063_8_2 | 3381 | 3548 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0063_8 | HRGMv2_0063_8_3 | 3571 | 5046 | + | 2.A.2.2.3 |
Gene ID: HRGMv2_0063_8_1
Type: CAZyme
Location: 164 - 3244 (-)
Type: CAZyme
Location: 164 - 3244 (-)
Gene ID: HRGMv2_0063_8_2
Type:
Location: 3381 - 3548 (-)
Type:
Location: 3381 - 3548 (-)
Gene ID: HRGMv2_0063_8_3
Type: TC
Location: 3571 - 5046 (+)
Type: TC
Location: 3571 - 5046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.