Cluster: HRGMv2_0063_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0063_7 | HRGMv2_0063_7_78 | 87780 | 89117 | + | GT4 |
| pfam | HRGMv2_0063_7 | HRGMv2_0063_7_79 | 89183 | 89965 | + | Phosphatase |
| TC | HRGMv2_0063_7 | HRGMv2_0063_7_80 | 90560 | 92041 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_0063_7_78
Type: CAZyme
Location: 87780 - 89117 (+)
Type: CAZyme
Location: 87780 - 89117 (+)
Gene ID: HRGMv2_0063_7_79
Type: pfam
Location: 89183 - 89965 (+)
Type: pfam
Location: 89183 - 89965 (+)
Gene ID: HRGMv2_0063_7_80
Type: TC
Location: 90560 - 92041 (+)
Type: TC
Location: 90560 - 92041 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.