Cluster: HRGMv2_0063_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0063_7 | HRGMv2_0063_7_58 | 62975 | 64585 | - | 4.A.1.1.8 |
| pfam | HRGMv2_0063_7 | HRGMv2_0063_7_59 | 65067 | 65945 | + | Exo_endo_phos |
| CAZyme | HRGMv2_0063_7 | HRGMv2_0063_7_60 | 66017 | 67831 | + | GH13_31 |
| CAZyme | HRGMv2_0063_7 | HRGMv2_0063_7_61 | 67959 | 69764 | + | GH13_31 |
Gene ID: HRGMv2_0063_7_58
Type: TC
Location: 62975 - 64585 (-)
Type: TC
Location: 62975 - 64585 (-)
Gene ID: HRGMv2_0063_7_59
Type: pfam
Location: 65067 - 65945 (+)
Type: pfam
Location: 65067 - 65945 (+)
Gene ID: HRGMv2_0063_7_60
Type: CAZyme
Location: 66017 - 67831 (+)
Type: CAZyme
Location: 66017 - 67831 (+)
Gene ID: HRGMv2_0063_7_61
Type: CAZyme
Location: 67959 - 69764 (+)
Type: CAZyme
Location: 67959 - 69764 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.