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Cluster: HRGMv2_0061_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0061_13 HRGMv2_0061_13_7 5715 8750 - GH2
TC HRGMv2_0061_13 HRGMv2_0061_13_8 8939 10381 + 2.A.2.2.3
NULL(UNKNOWN) HRGMv2_0061_13 HRGMv2_0061_13_9 10589 11062 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0061_13 HRGMv2_0061_13_10 11101 12135 + PG_binding_1 | HlyD_3
TC HRGMv2_0061_13 HRGMv2_0061_13_11 12132 12830 + 3.A.1.122.2
TC HRGMv2_0061_13 HRGMv2_0061_13_12 12820 14028 + 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_0061_13 HRGMv2_0061_13_13 13971 14111 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0061_13 HRGMv2_0061_13_14 14134 16017 - 4.C.1.1.14
Gene ID: HRGMv2_0061_13_7
Type: CAZyme
Location: 5715 - 8750 (-)
Gene ID: HRGMv2_0061_13_8
Type: TC
Location: 8939 - 10381 (+)
Gene ID: HRGMv2_0061_13_9
Type:
Location: 10589 - 11062 (+)
Gene ID: HRGMv2_0061_13_10
Type: pfam
Location: 11101 - 12135 (+)
Gene ID: HRGMv2_0061_13_11
Type: TC
Location: 12132 - 12830 (+)
Gene ID: HRGMv2_0061_13_12
Type: TC
Location: 12820 - 14028 (+)
Gene ID: HRGMv2_0061_13_13
Type:
Location: 13971 - 14111 (-)
Gene ID: HRGMv2_0061_13_14
Type: TC
Location: 14134 - 16017 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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