Cluster: HRGMv2_0061_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0061
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0061_8 | HRGMv2_0061_8_8 | 6148 | 7614 | + | GH32 |
| TC | HRGMv2_0061_8 | HRGMv2_0061_8_9 | 7814 | 9835 | + | 4.A.1.2.12 |
| TF | HRGMv2_0061_8 | HRGMv2_0061_8_10 | 9984 | 11009 | - | LacI |
| TC | HRGMv2_0061_8 | HRGMv2_0061_8_11 | 11294 | 11560 | + | 8.A.8.1.2 |
| TC | HRGMv2_0061_8 | HRGMv2_0061_8_12 | 11565 | 13247 | + | 8.A.7.1.2 |
Gene ID: HRGMv2_0061_8_8
Type: CAZyme
Location: 6148 - 7614 (+)
Type: CAZyme
Location: 6148 - 7614 (+)
Gene ID: HRGMv2_0061_8_9
Type: TC
Location: 7814 - 9835 (+)
Type: TC
Location: 7814 - 9835 (+)
Gene ID: HRGMv2_0061_8_10
Type: TF
Location: 9984 - 11009 (-)
Type: TF
Location: 9984 - 11009 (-)
Gene ID: HRGMv2_0061_8_11
Type: TC
Location: 11294 - 11560 (+)
Type: TC
Location: 11294 - 11560 (+)
Gene ID: HRGMv2_0061_8_12
Type: TC
Location: 11565 - 13247 (+)
Type: TC
Location: 11565 - 13247 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp916439125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0061_8_11 | vegan > omnivore | 3.24785 | 0.00937 |