Cluster: HRGMv2_0061_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0061
- CGC Family ID: CGCFAM_08288
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0061_70 | HRGMv2_0061_70_10 | 5811 | 6965 | + | GT1 |
| STP | HRGMv2_0061_70 | HRGMv2_0061_70_11 | 6968 | 7684 | - | TetR_C | TetR_N |
| pfam | HRGMv2_0061_70 | HRGMv2_0061_70_12 | 7707 | 8468 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | HRGMv2_0061_70 | HRGMv2_0061_70_13 | 8455 | 8970 | - | 3.A.1.105.8 |
Gene ID: HRGMv2_0061_70_10
Type: CAZyme
Location: 5811 - 6965 (+)
Type: CAZyme
Location: 5811 - 6965 (+)
Gene ID: HRGMv2_0061_70_11
Type: STP
Location: 6968 - 7684 (-)
Type: STP
Location: 6968 - 7684 (-)
Gene ID: HRGMv2_0061_70_12
Type: pfam
Location: 7707 - 8468 (-)
Type: pfam
Location: 7707 - 8468 (-)
Gene ID: HRGMv2_0061_70_13
Type: TC
Location: 8455 - 8970 (-)
Type: TC
Location: 8455 - 8970 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp916439125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.