dbCAN Logo

Cluster: HRGMv2_0060_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0060_11 HRGMv2_0060_11_18 20858 24586 - GH111
TC HRGMv2_0060_11 HRGMv2_0060_11_19 24746 25678 - 3.A.1.1.36
TC HRGMv2_0060_11 HRGMv2_0060_11_20 25675 26586 - 3.A.1.1.4
STP HRGMv2_0060_11 HRGMv2_0060_11_21 26693 28105 - SBP_bac_1
CAZyme HRGMv2_0060_11 HRGMv2_0060_11_22 28270 31095 - GH2
TF HRGMv2_0060_11 HRGMv2_0060_11_23 31207 32289 + LacI
pfam HRGMv2_0060_11 HRGMv2_0060_11_24 32413 33315 - DUF4862
TC HRGMv2_0060_11 HRGMv2_0060_11_25 33321 34796 - 2.A.1.12.1
CAZyme HRGMv2_0060_11 HRGMv2_0060_11_26 35060 37297 + GH33
Gene ID: HRGMv2_0060_11_18
Type: CAZyme
Location: 20858 - 24586 (-)
Gene ID: HRGMv2_0060_11_19
Type: TC
Location: 24746 - 25678 (-)
Gene ID: HRGMv2_0060_11_20
Type: TC
Location: 25675 - 26586 (-)
Gene ID: HRGMv2_0060_11_21
Type: STP
Location: 26693 - 28105 (-)
Gene ID: HRGMv2_0060_11_22
Type: CAZyme
Location: 28270 - 31095 (-)
Gene ID: HRGMv2_0060_11_23
Type: TF
Location: 31207 - 32289 (+)
Gene ID: HRGMv2_0060_11_24
Type: pfam
Location: 32413 - 33315 (-)
Gene ID: HRGMv2_0060_11_25
Type: TC
Location: 33321 - 34796 (-)
Gene ID: HRGMv2_0060_11_26
Type: CAZyme
Location: 35060 - 37297 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List